Water mite species of the genus Mideopsis Neuman, 1880 are common in running and standing waters in the Palaearctic. In the present study we used an integrative taxonomic approach by applying partial COI sequences (DNA-barcodes) and morphological characteristics to describe a new species, Mideopsis milankovici sp. nov. from the Mediterranean region of Montenegro. A high genetic distance (18.8-26% K2P) from three other known European congeners, M. crassipes Soar, 1904, M. orbicularis (Müller, 1776), and M. roztoczensis Biesiadka and Kowalik, 1979, support M. milankovici sp. nov. as a distinct species. From M. persicus Pešić and Saboori, 2015, a species known from South Iran, which resembles the new species in the shape of the ejaculatory complex, M. milankovici sp. nov. differs by the morphology of dorsal shield.